| 27 Nov 08 | C. Weale Chris Weale |  Bristol CityBRC | → |  Hereford UnitedHereford | Loan |
| 27 Nov 08 | J. Gowling Joshua Gowling | Bristol CityBRC | → | Hereford UnitedHereford | Loan |
| 27 Nov 08 | S. Brooker Steve Brooker | Bristol CityBRC | → |  Doncaster RoversDON | Loan |
| 14 Nov 08 | Mark Magee | Bristol CityBRC | → | SRXStafford RangersStafford Rangers | Loan |
| 24 Oct 08 | S. John Stern John |  SouthamptonSOU | → | Bristol CityBRC | Loan |
| 18 Sept 08 | J. Myrie-Williams Jennison Myrie-Williams | Bristol CityBRC | → |  Carlisle UnitedCAR | Loan |
| 15 Sept 08 | S. Murray Scott Murray | Bristol CityBRC | → |  Cheltenham TownCHL | Loan |
| 01 Sept 08 | J. Akinde John Akinde |  Ebbsfleet UnitedEBB | → | Bristol CityBRC | 140000 |
| 20 Aug 08 | R. Keogh Richard Keogh | Bristol CityBRC | → | Carlisle UnitedCAR | Undisclosed |
| 18 Aug 08 | A. Webster Andy Webster |  RangersRAN | → | Bristol CityBRC | Loan |
| 18 Aug 08 | A. Webster Andy Webster | RangersRAN | → | Bristol CityBRC | Loan |
| 15 Aug 08 | J. Myrie-Williams Jennison Myrie-Williams | Bristol CityBRC | → | Cheltenham TownCHL | Loan |
| 08 Aug 08 | T. Plummer Tristan Plummer | Bristol CityBRC | → |  Luton TownLUT | Loan |
| 07 Aug 08 | J. Wilson James Wilson | Bristol CityBRC | → |  BrentfordBRE | Loan |
| 07 Aug 08 | F. Artus Frankie Artus | Bristol CityBRC | → | BrentfordBRE | Loan |
| 31 Jul 08 | N. Maynard Nicky Maynard |  Crewe AlexandraCREW | → | Bristol CityBRC | 2250000 |
| 01 Jul 08 | N. Carle Nick Carle | Bristol CityBRC | → |  Crystal PalaceCRY | 1000000 |
| 27 Jun 08 | G. Williams Gavin Williams |  Ipswich TownIPS | → | Bristol CityBRC | Undisclosed |
| 17 Jun 08 | A. Russell Alex Russell | Bristol CityBRC | → | Cheltenham TownCHL | Free |
| 10 Mar 08 | Andrew Keogh | Bristol CityBRC | → | Cheltenham TownCHL | Loan |
| 29 Feb 08 | S. Henderson Stephen Henderson | Bristol CityBRC | → |  WeymouthWEY | Loan |
| 31 Jan 08 | K. Betsy Kevin Betsy | Bristol CityBRC | → |  WalsallWAL | Loan |
| 31 Jan 08 | E. Showunmi Enoch Showunmi | Bristol CityBRC | → |  Sheffield WednesdaySHW | Loan |
| 31 Jan 08 | D. Adebola Dele Adebola |  Coventry CityCOV | → | Bristol CityBRC | Undisclosed |
| 11 Jan 08 | S. Brooker Steve Brooker | Bristol CityBRC | → | Cheltenham TownCHL | Loan |
| 10 Jan 08 | A. Russell Alex Russell | Bristol CityBRC | → | Cheltenham TownCHL | Loan |