| 26 Sept 13 | J. Butland Jack Butland |  Stoke CitySTK | → |  BarnsleyBAR | Loan |
| 26 Sept 13 | J. Butland Jack Butland | Stoke CitySTK | → | BarnsleyBAR | Loan |
| 02 Sept 13 | M. Kightly Michael Kightly | Stoke CitySTK | → |  BurnleyBUR | Loan |
| 02 Sept 13 | R. Shotton Ryan Shotton | Stoke CitySTK | → |  Wigan AthleticWGA | Undisclosed |
| 02 Sept 13 | M. Kightly Michael Kightly | Stoke CitySTK | → | BurnleyBUR | Loan |
| 02 Sept 13 | R. Shotton Ryan Shotton | Stoke CitySTK | → | Wigan AthleticWGA | Loan |
| 02 Sept 13 | R. Shotton Ryan Shotton | Stoke CitySTK | → | Wigan AthleticWGA | Undisclosed |
| 02 Sept 13 | R. Shotton Ryan Shotton | Stoke CitySTK | → | Wigan AthleticWGA | Loan |
| 10 Jul 13 | M. Upson Matthew Upson | Stoke CitySTK | → |  Brighton & Hove AlbionBHA | Free |
| 10 Jul 13 | M. Upson Matthew Upson | Stoke CitySTK | → | Brighton & Hove AlbionBHA | Free |
| 02 Jul 13 | D. Whitehead Dean Whitehead | Stoke CitySTK | → |  MiddlesbroughMID | Free |
| 02 Jul 13 | D. Whitehead Dean Whitehead | Stoke CitySTK | → | MiddlesbroughMID | Free |
| 31 Jan 13 | J. Butland Jack Butland | Stoke CitySTK | → |  Birmingham CityBIR | Loan |
| 31 Jan 13 | R. Delap Rory Delap | Stoke CitySTK | → | BarnsleyBAR | Loan |
| 31 Jan 13 | R. Delap Rory Delap | Stoke CitySTK | → | BarnsleyBAR | Loan |
| 31 Jan 13 | M. Upson Matthew Upson | Stoke CitySTK | → | Brighton & Hove AlbionBHA | Loan |
| 31 Jan 13 | M. Upson Matthew Upson | Stoke CitySTK | → | Brighton & Hove AlbionBHA | Loan |
| 31 Jan 13 | J. Butland Jack Butland | Stoke CitySTK | → | Birmingham CityBIR | Loan |
| 31 Jan 13 | J. Butland Jack Butland | Birmingham CityBIR | → | Stoke CitySTK | Undisclosed |
| 31 Jan 13 | J. Butland Jack Butland | Birmingham CityBIR | → | Stoke CitySTK | Undisclosed |
| 10 Jan 13 | M. Tonge Michael Tonge | Stoke CitySTK | → |  Leeds UnitedLEE | Undisclosed |
| 10 Jan 13 | M. Tonge Michael Tonge | Stoke CitySTK | → | Leeds UnitedLEE | Undisclosed |