| 08 Sept 16 | M. Flamini Mathieu Flamini | XXX | → |  Crystal PalaceCRY | Free |
| 01 Sept 16 | J. Benteke Jonathan Benteke |  Zulte-WaregemZUL | → | Crystal PalaceCRY | Undisclosed |
| 31 Aug 16 | R. Inniss Ryan Inniss | Crystal PalaceCRY | → |  Southend UnitedSOUT | Loan |
| 31 Aug 16 | S. Kaikai Sullay Kaikai | Crystal PalaceCRY | → |  BrentfordBRE | Loan |
| 31 Aug 16 | J. Williams Jonny Williams | Crystal PalaceCRY | → |  Ipswich TownIPS | Loan |
| 31 Aug 16 | J. Williams Jonny Williams | Crystal PalaceCRY | → | Ipswich TownIPS | Loan |
| 31 Aug 16 | S. Kaikai Sullay Kaikai | Crystal PalaceCRY | → | BrentfordBRE | Loan |
| 31 Aug 16 | H. Boateng Hiram Boateng | Crystal PalaceCRY | → |  Bristol RoversBRI | Loan |
| 31 Aug 16 | L. Croll Luke Croll | Crystal PalaceCRY | → |  Exeter CityEXE | Loan |
| 31 Aug 16 | K. Anderson Keshi Anderson | Crystal PalaceCRY | → |  Bolton WanderersBOL | Loan |
| 30 Aug 16 | L. Rémy Loïc Rémy |  ChelseaCHE | → | Crystal PalaceCRY | Loan |
| 30 Aug 16 | F. Ladapo Freddie Ladapo | Crystal PalaceCRY | → |  Oldham AthleticOLD | Loan |
| 20 Aug 16 | C. Benteke Christian Benteke |  LiverpoolLIV | → | Crystal PalaceCRY | Undisclosed |
| 17 Aug 16 | M. Jedinak Mile Jedinak | Crystal PalaceCRY | → |  Aston VillaAVL | Undisclosed |
| 17 Aug 16 | M. Jedinak Mile Jedinak | Crystal PalaceCRY | → | Aston VillaAVL | Undisclosed |
| 15 Aug 16 | Y. Bolasie Yannick Bolasie | Crystal PalaceCRY | → |  EvertonEVE | Undisclosed |
| 02 Aug 16 | J. Williams Jerome Williams | Crystal PalaceCRY | → |  Peterborough UnitedPET | Undisclosed |
| 01 Aug 16 | J. Gray Jake Gray | Crystal PalaceCRY | → |  Luton TownLUT | Free |
| 01 Aug 16 | A. McCarthy Alex McCarthy | Crystal PalaceCRY | → |  SouthamptonSOU | Undisclosed |
| 05 Jul 16 | J. Tomkins James Tomkins |  West Ham UnitedWHU | → | Crystal PalaceCRY | 10000000 |
| 01 Jul 16 | S. Mandanda Steve Mandanda |  MarseilleMAR | → | Crystal PalaceCRY | Undisclosed |
| 01 Jul 16 | A. Townsend Andros Townsend |  Newcastle UnitedNEW | → | Crystal PalaceCRY | 13,000,000 |
| 01 Jul 16 | D. Gayle Dwight Gayle | Crystal PalaceCRY | → | Newcastle UnitedNEW | 10,000,000 |
| 01 Jul 16 | S. Mandanda Steve Mandanda | MarseilleMAR | → | Crystal PalaceCRY | Undisclosed |
| 01 Jul 16 | A. Townsend Andros Townsend | Newcastle UnitedNEW | → | Crystal PalaceCRY | 13,000,000 |
| 01 Jul 16 | D. Gayle Dwight Gayle | Crystal PalaceCRY | → | Newcastle UnitedNEW | 10,000,000 |
| 23 Mar 16 | H. Boateng Hiram Boateng | Crystal PalaceCRY | → |  Plymouth ArgylePLY | Loan |
| 10 Mar 16 | D. Gregory David Gregory | Crystal PalaceCRY | → |  Leyton OrientLEY | Loan |
| 01 Mar 16 | S. Kaikai Sullay Kaikai | Crystal PalaceCRY | → |  Shrewsbury TownSHR | Loan |
| 01 Feb 16 | J. Williams Jerome Williams | Crystal PalaceCRY | → | Leyton OrientLEY | Loan |
| 26 Jan 16 | E. Adebayor Emmanuel Adebayor | XXX | → | Crystal PalaceCRY | Free |
| 22 Jan 16 | J. Williams Jonny Williams | Crystal PalaceCRY | → |  Milton Keynes DonsMKD | Loan |
| 22 Jan 16 | J. Williams Jonny Williams | Crystal PalaceCRY | → | Milton Keynes DonsMKD | Loan |
| 13 Jan 16 | J. Hunt Jack Hunt | Crystal PalaceCRY | → |  Sheffield WednesdaySHW | Undisclosed |
| 13 Jan 16 | J. Hunt Jack Hunt | Crystal PalaceCRY | → | Sheffield WednesdaySHW | Undisclosed |