| 28 Nov 13 | H. Bunn Harry Bunn |  Manchester CityMNC | → |  Huddersfield TownHUD | Loan |
| 28 Nov 13 | H. Bunn Harry Bunn | Manchester CityMNC | → | Huddersfield TownHUD | Loan |
| 28 Nov 13 | Ellis Plummer | Manchester CityMNC | → |  Oldham AthleticOLD | Loan |
| 28 Oct 13 | G. Evans George Evans | Manchester CityMNC | → |  Crewe AlexandraCREW | Loan |
| 17 Oct 13 | A. Henshall Alex Henshall | Manchester CityMNC | → |  Bristol RoversBRI | Loan |
| 17 Sept 13 | George Swan | Manchester CityMNC | → |  Sheffield WednesdaySHW | Loan |
| 17 Sept 13 | George Swan | Manchester CityMNC | → | Sheffield WednesdaySHW | Loan |
| 02 Sept 13 | H. Bunn Harry Bunn | Manchester CityMNC | → |  Sheffield UnitedSHU | Loan |
| 02 Sept 13 | G. Barry Gareth Barry | Manchester CityMNC | → |  EvertonEVE | Loan |
| 02 Sept 13 | A. Razak Abdul Razak | Manchester CityMNC | → |  Anzhi MakhachkalaANZ | Loan |
| 01 Sept 13 | M. Demichelis Martín Demichelis |  Atletico MadridATL | → | Manchester CityMNC | Undisclosed |
| 01 Sept 13 | M. Demichelis Martín Demichelis | Atletico MadridATL | → | Manchester CityMNC | Undisclosed |
| 30 Aug 13 | Albert Runsak | Manchester CityMNC | → | Oldham AthleticOLD | Loan |
| 22 Aug 13 | D. Suárez Denis Suárez | Manchester CityMNC | → |  BarcelonaBAR | Undisclosed |
| 22 Aug 13 | D. Suárez Denis Suárez | Manchester CityMNC | → | BarcelonaBAR | Undisclosed |
| 22 Aug 13 | S. Sinclair Scott Sinclair | Manchester CityMNC | → |  West Bromwich AlbionWBA | Loan |
| 06 Aug 13 | R. Wabara Reece Wabara | Manchester CityMNC | → |  Doncaster RoversDON | Loan |
| 06 Aug 13 | R. Wabara Reece Wabara | Manchester CityMNC | → | Doncaster RoversDON | Loan |
| 19 Jul 13 | S. Jovetic Stevan Jovetic |  FiorentinaFIO | → | Manchester CityMNC | 30000000 |
| 19 Jul 13 | Á. Negredo Álvaro Negredo |  SevillaSEV | → | Manchester CityMNC | Undisclosed |
| 19 Jul 13 | Á. Negredo Álvaro Negredo | SevillaSEV | → | Manchester CityMNC | Undisclosed |
| 19 Jul 13 | S. Jovetic Stevan Jovetic | FiorentinaFIO | → | Manchester CityMNC | 30000000 |
| 18 Jul 13 | Maicon | Manchester CityMNC | → |  AS RomaROMA | Undisclosed |
| 18 Jul 13 | Maicon | Manchester CityMNC | → | AS RomaROMA | Undisclosed |
| 12 Jul 13 | J. Helan Jeremy Helan | Manchester CityMNC | → | Sheffield WednesdaySHW | Undisclosed |
| 12 Jul 13 | J. Helan Jeremy Helan | Manchester CityMNC | → | Sheffield WednesdaySHW | Undisclosed |
| 10 Jul 13 | K. Rekik Karim Rekik | Manchester CityMNC | → |  PSV EindhovenPSV | Loan |
| 10 Jul 13 | K. Rekik Karim Rekik | Manchester CityMNC | → | PSV EindhovenPSV | Loan |
| 02 Jul 13 | K. Touré Kolo Touré | Manchester CityMNC | → |  LiverpoolLIV | Free |
| 01 Jul 13 | J. Navas Jesús Navas | SevillaSEV | → | Manchester CityMNC | Undisclosed |
| 01 Jul 13 | W. Bridge Wayne Bridge | Manchester CityMNC | → |  ReadingREA | Free |
| 01 Jul 13 | J. Navas Jesús Navas | SevillaSEV | → | Manchester CityMNC | Undisclosed |
| 01 Jul 13 | O. Elabdellaoui Omar Elabdellaoui | Manchester CityMNC | → |  TSV Eintracht BraunschweigEBS | Undisclosed |
| 01 Jul 13 | Fernandinho | SDXShakhtar DonetskShakhtar Donetsk | → | Manchester CityMNC | Undisclosed |
| 01 Jul 13 | C. Tevez Carlos Tevez | Manchester CityMNC | → |  JuventusJUV | 12000000 |
| 01 Jul 13 | R. McGivern Ryan McGivern | Manchester CityMNC | → |  HibernianHIBS | Free |
| 01 Jul 13 | C. Tevez Carlos Tevez | Manchester CityMNC | → | JuventusJUV | 12000000 |
| 01 Jul 13 | R. McGivern Ryan McGivern | Manchester CityMNC | → | HibernianHIBS | Free |
| 26 Jun 13 | C. Tevez Carlos Tevez | Manchester CityMNC | → | JuventusJUV | 12000000 |
| 26 Jun 13 | C. Tevez Carlos Tevez | Manchester CityMNC | → | JuventusJUV | 12000000 |
| 07 Mar 13 | E. Holmen Johansen Eirik Holmen Johansen | Manchester CityMNC | → |  Scunthorpe UnitedSCU | Loan |
| 22 Feb 13 | A. Henshall Alex Henshall | Manchester CityMNC | → |  ChesterfieldCHES | Loan |
| 15 Feb 13 | K. Rekik Karim Rekik | Manchester CityMNC | → |  Blackburn RoversBLK | Loan |
| 15 Feb 13 | K. Rekik Karim Rekik | Manchester CityMNC | → | Blackburn RoversBLK | Loan |
| 31 Jan 13 | M. Abu Mohammed Abu | Manchester CityMNC | → |  LorientLOR | Loan |
| 31 Jan 13 | M. Abu Mohammed Abu | Manchester CityMNC | → | LorientLOR | Loan |
| 31 Jan 13 | Godsway Donyoh | XXX | → | Manchester CityMNC | Free |
| 31 Jan 13 | M. Balotelli Mario Balotelli | Manchester CityMNC | → |  AC MilanMIL | Undisclosed |
| 31 Jan 13 | Godsway Donyoh | Manchester CityMNC | → |  Djurgardens IFDJU | Loan |
| 31 Jan 13 | M. Balotelli Mario Balotelli | Manchester CityMNC | → | AC MilanMIL | Undisclosed |
| 30 Jan 13 | R. Wabara Reece Wabara | Manchester CityMNC | → |  BlackpoolBLP | Loan |
| 30 Jan 13 | R. Wabara Reece Wabara | Manchester CityMNC | → | BlackpoolBLP | Loan |
| 29 Jan 13 | J. Helan Jeremy Helan | Manchester CityMNC | → | Sheffield WednesdaySHW | Loan |
| 29 Jan 13 | J. Helan Jeremy Helan | Manchester CityMNC | → | Sheffield WednesdaySHW | Loan |
| 10 Jan 13 | A. Nimely Alex Nimely | Manchester CityMNC | → |  Crystal PalaceCRY | Loan |
| 10 Jan 13 | A. Nimely Alex Nimely | Manchester CityMNC | → | Crystal PalaceCRY | Loan |
| 08 Jan 13 | L. Scapuzzi Luca Scapuzzi | Manchester CityMNC | → |  VareseVarese | Loan |