| 21 Sept 16 | W. Brown Wes Brown | XXX | → |  Blackburn RoversBLK | Free |
| 31 Aug 16 | M. Emnes Marvin Emnes |  Swansea CitySWA | → | Blackburn RoversBLK | Loan |
| 31 Aug 16 | C. Mulgrew Charlie Mulgrew |  CelticCEL | → | Blackburn RoversBLK | Free |
| 31 Aug 16 | M. Emnes Marvin Emnes | Swansea CitySWA | → | Blackburn RoversBLK | Loan |
| 31 Aug 16 | C. Mulgrew Charlie Mulgrew | CelticCEL | → | Blackburn RoversBLK | Free |
| 26 Aug 16 | S. Duffy Shane Duffy | Blackburn RoversBLK | → |  Brighton & Hove AlbionBHA | Undisclosed |
| 26 Aug 16 | T. Hoban Tommie Hoban |  WatfordWAT | → | Blackburn RoversBLK | Loan |
| 26 Aug 16 | T. Hoban Tommie Hoban | WatfordWAT | → | Blackburn RoversBLK | Loan |
| 26 Aug 16 | D. Williams Derrick Williams |  Bristol CityBRC | → | Blackburn RoversBLK | Undisclosed |
| 25 Aug 16 | M. Samuelsen Martin Samuelsen |  West Ham UnitedWHU | → | Blackburn RoversBLK | Loan |
| 25 Aug 16 | M. Samuelsen Martin Samuelsen | West Ham UnitedWHU | → | Blackburn RoversBLK | Loan |
| 11 Aug 16 | S. Gallagher Sam Gallagher |  SouthamptonSOU | → | Blackburn RoversBLK | Loan |
| 11 Aug 16 | S. Gallagher Sam Gallagher | SouthamptonSOU | → | Blackburn RoversBLK | Loan |
| 08 Aug 16 | J. O'Sullivan John O'Sullivan | Blackburn RoversBLK | → |  Accrington StanleyACCR | Loan |
| 02 Aug 16 | G. Greer Gordon Greer | XXX | → | Blackburn RoversBLK | Free |
| 01 Aug 16 | M. Kilgallon Matthew Kilgallon | Blackburn RoversBLK | → |  Bradford CityBRD | Free |
| 25 Jul 16 | L. Williamson Lee Williamson | Blackburn RoversBLK | → |  Burton AlbionBRT | Free |
| 21 Jul 16 | G. Hanley Grant Hanley | Blackburn RoversBLK | → |  Newcastle UnitedNEW | Undisclosed |
| 01 Jul 16 | D. Graham Danny Graham |  SunderlandSUN | → | Blackburn RoversBLK | Free |
| 01 Jul 16 | J. Byrne Jack Byrne |  Manchester CityMNC | → | Blackburn RoversBLK | Loan |
| 01 Jul 16 | S. Hendrie Stephen Hendrie | West Ham UnitedWHU | → | Blackburn RoversBLK | Loan |
| 01 Jul 16 | L. Feeney Liam Feeney |  Bolton WanderersBOL | → | Blackburn RoversBLK | Free |
| 01 Jul 16 | D. Graham Danny Graham | SunderlandSUN | → | Blackburn RoversBLK | Free |
| 01 Jul 16 | T. Spurr Thomas Spurr | Blackburn RoversBLK | → |  Preston North EndPNE | Free |
| 01 Jul 16 | J. Byrne Jack Byrne | Manchester CityMNC | → | Blackburn RoversBLK | Loan |
| 01 Jul 16 | S. Hendrie Stephen Hendrie | West Ham UnitedWHU | → | Blackburn RoversBLK | Loan |
| 18 Mar 16 | N. Delfouneso Nathan Delfouneso | Blackburn RoversBLK | → |  BuryBURY | Loan |
| 17 Mar 16 | C. Taylor Chris Taylor | Blackburn RoversBLK | → |  MillwallMIL | Loan |
| 13 Feb 16 | M. Grimes Matt Grimes | Swansea CitySWA | → | Blackburn RoversBLK | Loan |
| 13 Feb 16 | M. Grimes Matt Grimes | Swansea CitySWA | → | Blackburn RoversBLK | Loan |
| 01 Feb 16 | J. Rhodes Jordan Rhodes | Blackburn RoversBLK | → |  MiddlesbroughMID | Undisclosed |
| 01 Feb 16 | S. Petshi Sacha Petshi | Blackburn RoversBLK | → | CXXCréteilCRE | Undisclosed |
| 01 Feb 16 | J. Gómez Jordi Gómez | SunderlandSUN | → | Blackburn RoversBLK | Loan |
| 01 Feb 16 | J. Gómez Jordi Gómez | SunderlandSUN | → | Blackburn RoversBLK | Loan |
| 29 Jan 16 | T. Watt Tony Watt |  Charlton AthleticCHA | → | Blackburn RoversBLK | Loan |
| 26 Jan 16 | M. Olsson Markus Olsson | Blackburn RoversBLK | → |  Derby CountyDER | Undisclosed |
| 20 Jan 16 | E. Ward Elliott Ward |  AFC BournemouthBOU | → | Blackburn RoversBLK | Undisclosed |
| 20 Jan 16 | D. Graham Danny Graham | SunderlandSUN | → | Blackburn RoversBLK | Loan |
| 20 Jan 16 | E. Ward Elliott Ward | AFC BournemouthBOU | → | Blackburn RoversBLK | Undisclosed |
| 20 Jan 16 | D. Graham Danny Graham | SunderlandSUN | → | Blackburn RoversBLK | Loan |
| 15 Jan 16 | S. Jackson Simeon Jackson | XXX | → | Blackburn RoversBLK | Free |
| 15 Jan 16 | J. O'Sullivan John O'Sullivan | Blackburn RoversBLK | → | BuryBURY | Loan |
| 05 Jan 16 | E. Bennett Elliott Bennett |  Norwich CityNOR | → | Blackburn RoversBLK | Loan |
| 05 Jan 16 | E. Bennett Elliott Bennett | Norwich CityNOR | → | Blackburn RoversBLK | Loan |